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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc7a6, solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
Sequence ID:NM_178798
Entrez Gene ID:330836
Ensembl ID:ENSMUSG00000031904

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 106168874 - 106197845

NM_178798 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
180108692774108692853
81639108703001108703559
640765108713516108713641
766910108716238108716382
9111034108717050108717173
10351138108717392108717495
11391235108718320108718416
12361385108719261108719410
13861569108719752108719935
15703730108720443108722603

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4949962Full LengthBC038404solute carrier family 7 (cationic amino acid transporter, y+ system), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848913  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178798 NP_848913 Q8BGK6 AA_permease

Related Sequences

 
mRNAGenPeptSwissProt
BC038404 AAH38404 Q8BGK6
AK049478 BAC33770 Q8BGK6
AK053899 BAC35581 Q8BGK6
AK129099 BAC97909 Q8BGK6
AK157127 BAE33971 Q8BGK6
AK164666 BAE37866 Q8BGK6
AK165629 BAE38304 Q8BGK6
AK165979 BAE38497 Q8BGK6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc7a6 NP_848913 R.norvegicus Slc7a6 307811   NP_001100894 98
H.sapiens SLC7A6 9057 Gene Info NP_001070253 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)