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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hbb-b1, hemoglobin, beta adult major chain
Sequence ID:NM_008220
Entrez Gene ID:15129
Ensembl ID:ENSMUSG00000073940

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 103812655 - 103813866

NM_008220 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1257110961041110961297
258480110961952110962174
481626110962291110962436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062252Full LengthBC156762hemoglobin, beta adult major chain
100015947BC152793hemoglobin, beta adult major chain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058652  NP_032246  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008220 NP_032246   Globin
NM_016956 NP_058652 P02089
Q549D9
Q54AH9
Globin

Related Sequences

 
mRNAGenPeptSwissProt
M10524 AAA37785 Q61650
M19236 AAA37788 P02088
AF149782 AAD41830 P02089
Q549D9
Q54AH9
AF071431 AAD49106 Q9R1N1
BC027434 AAH27434 P02089
Q549D9
Q54AH9
BC032264 AAH32264 Q9QUN8
P02089
BC152793 AAI52794  
BC156762 AAI56763  
AB020013 BAA77353 P02088
AB020014 BAA77354 Q9QUN8
AB020015 BAA77355 P02088
AB020016 BAA77356 Q9QUN8
AB020017 BAA77357 P02089
Q549D9
Q54AH9
AK002258 BAB21971 P02088
AK002394 BAB22067 P02088
AK003096 BAB22562 P02088
AK003472 BAB22806 P02088
AK005442 BAB24036 P02088
AK005490 BAB24075 P02088
AK005496 BAB24080 P02088
AK010902 BAB27255 P02088
AK010980 BAB27302 P02088
AK010981 BAB27303 P02088
AK010991 BAB27310 P02088
AK010993 BAB27312 P02088
AK011006 BAB27325 P02088
AK011013 BAB27331 P02088
AK011016 BAB27334 P02088
AK011027 BAB27343 P02088
AK011033 BAB27347 P02088
AK011050 BAB27360 P02088
AK011052 BAB27361 P02088
AK011057 BAB27365 P02088
AK011067 BAB27374 P02088
AK011069 BAB27376 P02088
AK011077 BAB27382 P02088
AK011083 BAB27387 P02088
AK011102 BAB27399 P02088
AK012551 BAB28311 P02088
AK027903 BAC25655 P02088
AK027904 BAC25656 P02088
AK028067 BAC25734 P02088
AK088149 BAC40173 P02088
AK133714 BAE21794 P02088
AK147001 BAE27598 P02088
AK160629 BAE35926 P02088
AK161021 BAE36152 P02088
AK165490 BAE38217 P02088
AK167615 BAE39668 P02088
AK168412 BAE40327 P02088
AK168477 BAE40366 P02088
AK168562 BAE40435 P02088
AK168584 BAE40453 P02088
AK168819 BAE40646 P02088
AK168826 BAE40653 P02088
AK168846 BAE40669 P02088
AB364477 BAG16712 B1Q450
AB364478 BAG16713 Q549D9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hbb-b1 NP_032246 M.musculus Beta-s 100503605   XP_003084764 100
R.norvegicus Hbb 24440   NP_150237 93
R.norvegicus LOC689064 689064   NP_001104739 90
R.norvegicus LOC100134871 100134871   NP_001106694 90
R.norvegicus Hbb-b1 361619   NP_942071 83
H.sapiens HBB 3043 Gene Info NP_000509 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)