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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rpl10a, Ribosomal protein L10A
Sequence ID:BU562978
Entrez Gene ID:19896
Ensembl ID:ENSMUSG00000037805

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 28329027 - 28330579


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3494193Full LengthBC006039ribosomal protein L10A
5712034Full LengthBC083346ribosomal protein L10A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011287 NP_035417 P53026 Ribosomal_L1

Related Sequences

 
mRNAGenPeptSwissProt
U12403 AAA86464 P53026
BC006039 AAH06039 Q99JL6
BC083346 AAH83346 Q5XJF6
AK150743 BAE29816 Q5XJF6
AK151172 BAE30175 Q5XJF6
AK153863 BAE32219 Q3U561

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rpl10a NP_035417 H.sapiens RPL10A 4736 Gene Info NP_009035 100
R.norvegicus Rpl10a 81729   NP_112327 100
A.gambiae AgaP_AGAP011298 1270634   XP_309349 82
D.melanogaster RpL10Ab 39338   NP_648514 77
C.elegans rpl-1 171853   NP_491061 73
S.pombe rpl101 2539222   NP_587891 65
S.pombe rpl102 2540378   NP_596267 65
N.crassa NCU00294 3873856   XP_957765 64
A.thaliana PGY1 817299   NP_850104 64
P.falciparum PF14_0391 811973   XP_001348565 63
A.thaliana AT5G22440 832305   NP_001078612 63
A.thaliana AT1G08360 837356   NP_563813 63
S.cerevisiae RPL1B 852742   NP_011380 60
S.cerevisiae RPL1A 855881   NP_015104 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)