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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Calr, calreticulin
Sequence ID:NM_007591
Entrez Gene ID:12317
Ensembl ID:ENSMUSG00000003814

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8 37.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 84842092 - 84842240

NM_007591 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17578736598687366742
7588508736684287366934
8519948736796387368106
99511088736827687368389
110913188736847287368681
131914138736876987368863
141416178736976087369963
161817198737014887370249
172019438737060687370829

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2655918Full LengthBC003453calreticulin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007591 NP_031617 P14211 Calreticulin

Related Sequences

 
mRNAGenPeptSwissProt
M92988 AAA37569 P14211
BC003453 AAH03453 P14211
EU639407 ACC77467 B2MWM9
AK075605 BAC35852 P14211
AK136191 BAE22866 Q3UWP8
AK160197 BAE35687 P14211
X14926 CAA33053 P14211
X56603 CAA39940 Q62041

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Calr NP_031617 R.norvegicus Calr 64202   NP_071794 98
H.sapiens CALR 811 Gene Info NP_004334 94
D.melanogaster Crc 41166   NP_524293 68
A.gambiae AgaP_AGAP004212 1274052   XP_313116 67
C.elegans crt-1 178997   NP_504575 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta