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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Exosc3, exosome component 3
Sequence ID:NM_025513
Entrez Gene ID:66362
Ensembl ID:ENSMUSG00000028322

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4|4 B2

Chromosomal Position (from UCSC)

Chromosomal Position:4: 45316612 - 45317724

NM_025513 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
24004532950145329899
4015524533054945330700
5537024533242145332570
70310354533314245333474

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3371550Full LengthBC054085exosome component 3
5012335Full LengthBC023669exosome component 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025513 NP_079789 Q7TQK4  

Related Sequences

 
mRNAGenPeptSwissProt
BC023669 AAH23669 Q7TQK4
BC054085 AAH54085 Q7TQK4
AK006281 BAB24501 Q7TQK4
AK009165 BAB26116 Q7TQK4
AK016397 BAB30215 Q9CUF0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Exosc3 NP_079789 R.norvegicus Exosc3 313243   NP_001101406 98
H.sapiens EXOSC3 51010 Gene Info NP_057126 88
D.melanogaster Rrp40 319033   NP_722725 47
A.gambiae AgaP_AGAP010247 1279671   XP_319438 46
A.thaliana AT2G25355 817074   NP_565592 41
C.elegans exos-3 186604   NP_492751 40
A.thaliana AT4G32175 829350   NP_680755 38
S.pombe SPAC22A12.12c 2541837   NP_593242 38
N.crassa NCU00693 3881895   XP_965833 37
S.cerevisiae RRP40 854023   NP_014499 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)