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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Swsap1, SWIM type zinc finger 7 associated protein 1
Sequence ID:NM_025870
Entrez Gene ID:66962
Ensembl ID:ENSMUSG00000051238

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 A4

Chromosomal Position (from UCSC)

Chromosomal Position:9: 21955763 - 21958263

NM_025870 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12522176019621760447
25318462176112021762713

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40142491Full LengthBC150493RIKEN cDNA 2310047B19 gene
5134560IncompleteBC019749RIKEN cDNA 2310047B19 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025870 NP_080146 Q8VCI7  

Related Sequences

 
mRNAGenPeptSwissProt
BC019749 AAH19749 Q8VCI7
BC150493 AAI50494 Q8VCI7
AK009864 BAB26550 Q8VCI7
AK014010 BAB29112 Q9CXT5
AK043948 BAC31710 Q8VCI7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2310047B19Rik NP_080146 R.norvegicus Swsap1 363029   NP_001102225 86
H.sapiens SWSAP1 126074 Gene Info NP_787067 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)