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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnfsf8, tumor necrosis factor (ligand) superfamily, member 8
Sequence ID:NM_009403
Entrez Gene ID:21949
Ensembl ID:ENSMUSG00000028362

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C1|4 32.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 63832823 - 63861284

NM_009403 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116786349385763495534
167917506349809263498163
175117936351215363512195
179422286352188363522317

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126412Full LengthBC117093tumor necrosis factor (ligand) superfamily, member 8
40126416Full LengthBC117097tumor necrosis factor (ligand) superfamily, member 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033429  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009403 NP_033429 P32972 TNF

Related Sequences

 
mRNAGenPeptSwissProt
L09754 AAA74595 P32972
BC117093 AAI17094 Q544U1
BC117097 AAI17098 Q544U1
AK030916 BAC27182 P32972
Q544U1
AK157270 BAE34022 Q3U033

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnfsf8 NP_033429 H.sapiens TNFSF8 944 Gene Info NP_001235 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)