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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sox11, SRY-box containing gene 11
Sequence ID:NM_009234
Entrez Gene ID:20666
Ensembl ID:ENSMUSG00000063632

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 27336370 - 27337429

NM_009234 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
184512801913228027582

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5716171Full LengthBC062095SRY-box containing gene 11
30144974Full LengthBC078643SRY-box containing gene 11

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009234 NP_033260 Q7M6Y2 HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
AF009414 AAB82425 Q7M6Y2
BC062095 AAH62095 Q7M6Y2
BC078643 AAH78643 Q6AZA6
AB108675 BAC75670 Q7M6Y2
AK146514 BAE27226 Q7M6Y2
AK165693 BAE38341 Q7M6Y2
Z18960 CAA79485 Q7M6Y2
BK001484 DAA01568 Q7M6Y2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sox11 NP_033260 R.norvegicus Sox11 84046   NP_445801 99
H.sapiens SOX11 6664 Gene Info NP_003099 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)