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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Irg1, immunoresponsive gene 1
Sequence ID:NM_008392
Entrez Gene ID:16365
Ensembl ID:ENSMUSG00000022126

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 E2.3|14 53.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 103046976 - 103056096

NM_008392 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
168103446228103446295
69230103448491103448652
231320103448825103448914
321526103450536103450741
5272588103453728103455789

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008392 NP_032418    

Related Sequences

 
mRNAGenPeptSwissProt
L38281 AAA74554 P54987
AK036446 BAC29433 P54987
AK152177 BAE31008 P54987
AK152248 BAE31070 P54987
AK152332 BAE31131 P54987
AK152635 BAE31377 P54987
AK172001 BAE42768 P54987
AK172298 BAE42932 P54987

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Irg1 NP_032418 R.norvegicus Irg1 306127   NP_001100752 93
H.sapiens IRG1 730249 Gene Info XP_001133269 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)