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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Msh2, mutS homolog 2 (E. coli)
Sequence ID:NM_008628
Entrez Gene ID:17685
Ensembl ID:ENSMUSG00000024151

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E4|17 45.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 87672544 - 87723712

 Exon Info From UCSC:
NM_008628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4951173Full LengthBC047117mutS homolog 2 (E. coli)
6401835Full LengthBC050897mutS homolog 2 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032654  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008628 NP_032654 P43247
Q3TZI5
MutS_V
MutS_I
MutS_II
MutS_IV
MutS_III

Related Sequences

 
mRNAGenPeptSwissProt
U21011 AAA75027 P43247
BC047117 AAH47117 P43247
Q3TZI5
BC050897 AAH50897 Q80V79
AK157842 BAE34223 P43247
Q3TZI5
X81143 CAA57049 P43247
Q3TZI5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Msh2 NP_032654 R.norvegicus Msh2 81709   NP_112320 94
H.sapiens MSH2 4436 Gene Info NP_000242 93
N.crassa NCU02230 3875790   XP_959643 50
D.melanogaster spel1 34842   NP_523565 45
S.pombe msh2 2540695   NP_595967 44
A.gambiae AgaP_AGAP010282 1279706   XP_319476 43
A.thaliana MSH2 821383   NP_566804 43
S.cerevisiae MSH2 854063   NP_014551 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)