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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cda, cytidine deaminase
Sequence ID:NM_028176
Entrez Gene ID:72269
Ensembl ID:ENSMUSG00000028755

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 138338529 - 138367960

NM_028176 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
25497137894442137894914
498555137899421137899478
556667137907098137907209
668833137923704137923869

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6433052Full LengthBC050114cytidine deaminase
4216440IncompleteBC022649cytidine deaminase
5683570IncompleteBC056179cytidine deaminase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082452  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_028176 NP_082452 P56389 EC 3.5.4.5 dCMP_cyt_deam_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC022649 AAH22649 Q8R219  
BC050114 AAH50114 P56389 EC 3.5.4.5
AK008793 BAB25898 P56389 EC 3.5.4.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cda NP_082452 R.norvegicus Cda 362638   NP_001102158 98
H.sapiens CDA 978 Gene Info NP_001776 82
S.pombe cdd1 2541551   NP_594321 46
N.crassa NCU08359 3881419   XP_965262 41
S.cerevisiae CDD1 850946   NP_013346 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)