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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Shroom3, shroom family member 3
Sequence ID:NM_001077595
Entrez Gene ID:27428
Ensembl ID:ENSMUSG00000029381

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E3|5 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 92683434 - 92964951

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053661Full LengthBC145113shroom family member 3
3484373IncompleteBC003909shroom family member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056571  

Protein Infomation

NM_001077595 NP_001071063    
NM_001077596 NP_001071064    
NM_015756 NP_056571 Q9QXN0 PDZ

Related Sequences

AF199421 AAF13269 Q9QXN0
AF199422 AAF13270 Q9QXN0
BC003909 AAH03909 Q9QXN0
BC145113 AAI45114 B7ZNA0
AK129371 BAC98181 Q9QXN0
AK147493 BAE27948 Q9QXN0
AK164918 BAE37966 Q9QXN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Shroom3 NP_056571 R.norvegicus Shroom3 305230   NP_001094359 88
H.sapiens SHROOM3 57619 Gene Info NP_065910 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)