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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bcan, Brevican
Sequence ID:NM_007529
NM_001109758
Entrez Gene ID:12032
Ensembl ID:ENSMUSG00000004892

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3 42.7

Chromosomal Position (from UCSC)

Chromosomal Position:3: 87987534 - 88000155

 Exon Info From UCSC:
NM_007529
NM_001109758

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5695027Full LengthBC052032brevican

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031555  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001109758 NP_001103228    
NM_007529 NP_031555 Q61361 EGF
ig
Lectin_C
Sushi
Xlink

Related Sequences

 
mRNAGenPeptSwissProt
BC052032 AAH52032 Q61361
AK161874 BAE36617 Q3TSQ8
AK163646 BAE37435 Q3TQE9
X87096 CAA60575 Q61361

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bcan NP_031555 R.norvegicus Bcan 25393   NP_001028837 96
H.sapiens BCAN 63827 Gene Info NP_068767 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)