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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hba-a1, hemoglobin alpha, adult chain 1
Sequence ID:NM_008218
Entrez Gene ID:15122
Ensembl ID:ENSMUSG00000069919

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A4|11 16.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 32283674 - 32284476

NM_008218 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11303218367132183800
1313353218392332184127
3365593218426232184485

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5684314Full LengthBC043020hemoglobin alpha, adult chain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032244  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008218 NP_032244 P01942 Globin

Related Sequences

 
mRNAGenPeptSwissProt
L75940 AAB59723 Q61287
BC043020 AAH43020 Q91VB8
AK003077 BAB22552 Q91VB8
AK010923 BAB27269 Q91VB8
AK010927 BAB27272 Q91VB8
AK010933 BAB27277 Q91VB8
AK010937 BAB27279 Q91VB8
AK010987 BAB27307 Q91VB8
AK011018 BAB27336 Q91VB8
AK011023 BAB27340 Q91VB8
AK011025 BAB27342 Q91VB8
AK011028 BAB27344 Q91VB8
AK011055 BAB27364 Q91VB8
AK011063 BAB27370 Q9CY10
AK011076 BAB27381 Q9CY06
AK012329 BAB28166 Q91VB8
AK012755 BAB28446 Q91VB8
AK171893 BAE42724 Q91VB8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hba-a1 NP_032244 M.musculus Hba-a2 110257 Gene Info NP_001077424 100
H.sapiens HBA2 3040 Gene Info NP_000508 87
H.sapiens HBA1 3039 Gene Info NP_000549 87
R.norvegicus LOC360504 360504   NP_001007723 85
R.norvegicus Hba-a2 25632   NP_037228 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)