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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Snap25, synaptosomal-associated protein 25
Sequence ID:NM_011428
Entrez Gene ID:20614
Ensembl ID:ENSMUSG00000027273

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F3|2 78.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 136756129 - 136781143

NM_011428 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1151136539185136539335
152285136581803136581936
286327136584046136584087
328376136589308136589356
377494136595792136595909
495620136599630136599755
621765136603071136603215
7662119136606810136608163

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4504644Full LengthBC018249synaptosomal-associated protein 25

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035558  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011428 NP_035558 P60879 SNAP-25
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
M22012 AAA61741 P60879
BC018249 AAH18249 P60879
AF483516 AAL90790 P60879
AF483517 AAL90791 P60879
AK078038 BAC37105 P60879

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snap25 NP_035558 R.norvegicus Snap25 25012   NP_112253 100
H.sapiens SNAP25 6616 Gene Info NP_003072 96
D.melanogaster Snap24 41193   NP_524298 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)