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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
Sequence ID:NM_080465
Entrez Gene ID:140492
Ensembl ID:ENSMUSG00000054477

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 C|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 45560153 - 45685883

NM_080465 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14714571980745720277
4725674572087445720969
5689864575165945752077
98711284581485145814992
112912394582987145829981
124013674583659045836717
136814374584272445842793
143820464584492845845536

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860675Full LengthBC137656potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
40129990Full LengthBC125475potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536713  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080465 NP_536713 Q540U9
P58390
CaMBD
SK_channel
Ion_trans_2

Related Sequences

 
mRNAGenPeptSwissProt
BC125475 AAI25476 Q540U9
BC137656 AAI37657 Q540U9
AF357240 AAK48901 Q540U9
P58390
AY123778 AAM88568 Q540U9
P58390
AY280964 AAP31202 Q80X11
AF533008 AAQ10283 Q540U9
P58390
EU478850 ACC86999 B4YDY0
AK033158 BAC28176 Q8CCH4
AK039033 BAC30212 Q8CAD4
AK050390 BAC34231 Q8C7F3
AK149082 BAE28732 Q3UF29

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kcnn2 NP_536713 R.norvegicus Kcnn2 54262   NP_062187 100
H.sapiens KCNN2 3781 Gene Info NP_067627 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)