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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Chrna1, cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
Sequence ID:NM_007389
Entrez Gene ID:11435
Ensembl ID:ENSMUSG00000027107

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 73563280 - 73580306

NM_007389 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130277340133773404363
302832677340475873404997
326834917340614873406371
349237297340846373408700
373039257340946973409664
392640357341131673411425
403640807341237773412421
408142267341254273412687
422742887341830173418362

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860697Full LengthBC137678cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
40129954Full LengthBC125439cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031415  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007389 NP_031415 P04756 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
BC125439 AAI25440 Q05A24
P04756
BC137678 AAI37679 Q05A24
EF520684 ABS82392 A9XLH3
AK029177 BAC26337 P04756
AK132589 BAE21249 Q3V1A2
X03986 CAA27624 P04756

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrna1 NP_031415 R.norvegicus Chrna1 79557   NP_077811 98
H.sapiens CHRNA1 1134 Gene Info NP_001034612 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta