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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit
Sequence ID:NM_031869
Entrez Gene ID:19079
Ensembl ID:ENSMUSG00000029513

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 116013587 - 116024390

NM_031869 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11137116463598116464734
11381206116464922116464990
12071340116467956116468089
13411455116470012116470126
14561549116470382116470475
15501713116471491116471654
17142051116474099116474436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585002Full LengthBC016398protein kinase, AMP-activated, beta 1 non-catalytic subunit
963525IncompleteBC027650protein kinase, AMP-activated, beta 1 non-catalytic subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114075  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031869 NP_114075 Q9R078
Q542K0
AMPKBI

Related Sequences

 
mRNAGenPeptSwissProt
BC016398 AAH16398 Q9R078
Q542K0
AK088250 BAC40237 Q9R078
Q542K0
AK153552 BAE32089 Q3U5I9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prkab1 NP_114075 H.sapiens PRKAB1 5564 Gene Info NP_006244 97
R.norvegicus Prkab1 83803   NP_114182 97
D.melanogaster alc 35931   NP_610460 64
A.gambiae AgaP_AGAP008195 1277776   XP_317273 63
A.thaliana AT4G16360 827331   NP_193369 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)