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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itpr3, inositol 1,4,5-triphosphate receptor 3
Sequence ID:NM_080553
Entrez Gene ID:16440
Ensembl ID:ENSMUSG00000042644

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 19.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 27057535 - 27122223

 Exon Info From UCSC:
NM_080553

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3588703IncompleteBC006773inositol 1,4,5-triphosphate receptor 3
5345968IncompleteBC023776inositol 1,4,5-triphosphate receptor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542120  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080553 NP_542120 P70227 Ion_trans
RYDR_ITPR
MIR
RIH_assoc

Related Sequences

 
mRNAGenPeptSwissProt
BC006773 AAH06773 Q922U9
BC010323 AAH10323 P70227
BC023776 AAH23776 Q0IJ80
AK028491 BAC25977 P70227
AB182289 BAD90683 P70227
Z71174 CAA94862 P70227

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itpr3 NP_542120 R.norvegicus Itpr3 25679   NP_037270 99
H.sapiens ITPR3 3710 Gene Info NP_002215 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)