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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Rps27a, ribosomal protein S27A
Sequence ID:NM_001033865
Entrez Gene ID:78294
Ensembl ID:ENSMUSG00000020460

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 29545846 - 29547861

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1380923Full LengthBC096392ribosomal protein S27A
3487291Full LengthBC002108ribosomal protein S27A
6408051Full LengthBC081446ribosomal protein S27A

Protein Infomation

NM_001033865 NP_001029037 Q642L7  
NM_024277 NP_077239 Q642L7

Related Sequences

BC002108 AAH02108 Q642L7
BC081446 AAH81446 Q642L7
BC096392 AAH96392 Q642L7
AK018706 BAB31357 Q642L7
AK159742 BAE35335 Q3TWD1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Rps27a NP_001029037 R.norvegicus Rps27a 81777   NP_112375 100
R.norvegicus LOC100363345 100363345   XP_002729582 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)