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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxa1, forkhead box A1
Sequence ID:NM_008259
Entrez Gene ID:15375
Ensembl ID:ENSMUSG00000035451

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C1|12 26.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57542028 - 57545735

NM_008259 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
227305864161858644346
273131885864665058647107

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5720113Full LengthBC096524forkhead box A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032285  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008259 NP_032285 P35582 Fork_head
Fork_head_N

Related Sequences

 
mRNAGenPeptSwissProt
L10408 AAA03160 Q61583
U44752 AAA86760 P35582
BC096524 AAH96524 P35582
X74936 CAA52890 P35582

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxa1 NP_032285 H.sapiens FOXA1 3169 Gene Info NP_004487 96
R.norvegicus Foxa1 25098   NP_036874 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)