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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dynlt1c, dynein light chain Tctex-type 1C
Sequence ID:NM_001166630
Entrez Gene ID:100040563
Ensembl ID:ENSMUSG00000000579

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cerebrum, embryonic tissue, eye, fetus, liver, lung, lymphoreticular, mammary gland, nervous, pancreas, peripheral nervous system, placenta, pooled tissue, prostate, retina, spleen, stem cell, testis, uncharacterized tissue
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A1|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 6435084 - 6436293

NM_001166630 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15866009036600960
5910066033826603423
10122466065066606629
22530266069686607045
30369366073956607785

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166630 NP_001160102    
NM_009342 NP_033368 P51807 Tctex-1

Related Sequences

 
mRNAGenPeptSwissProt
M25825 AAA40408 P51807
BC043018 AAH43018 P51807
BC089472 AAH89472 Q5EBK8
EF110999 ABL63826 A1E5T5
AK004520 BAB23343 Q9CT63
AK133788 BAE21842 P51807
AK153971 BAE32288 P51807
AK168478 BAE40367 P51807

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dynlt1c NP_001160102 M.musculus Dynlt1b 21648 Gene Info NP_033368 100
M.musculus Dynlt1a 100310872 Gene Info NP_001160101 100
M.musculus Dynlt1f 100040531 Gene Info NP_001160099 100
M.musculus Dynlt1d 100040603   XP_001475667 100
M.musculus Dynlt1e 100040631 Gene Info XP_001475796 100
R.norvegicus Dynlt1 83462   NP_112608 96
H.sapiens DYNLT1 6993 Gene Info NP_006510 94
A.gambiae AgaP_AGAP001229 1281942   XP_321929 76
D.melanogaster Dlc90F 42199   NP_477356 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)