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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Frat1, frequently rearranged in advanced T cell lymphomas
Sequence ID:NM_008043
Entrez Gene ID:14296

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C3|19 37.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 41830037 - 41831221

NM_008043 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126144190445941907072

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055599Full LengthBC140987frequently rearranged in advanced T-cell lymphomas

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032069  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008043 NP_032069 P70339 GSK-3_bind

Related Sequences

 
mRNAGenPeptSwissProt
U58974 AAB72010 P70339
BC140987 AAI40988 B2RU64

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Frat1 NP_032069 H.sapiens FRAT1 10023 Gene Info NP_005470 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta