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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccdc101, coiled-coil domain containing 101
Sequence ID:NM_029339
Entrez Gene ID:75565
Ensembl ID:ENSMUSG00000030714

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F4

Chromosomal Position (from UCSC)

Chromosomal Position:7: 126649401 - 126672778

NM_029339 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1169133792822133792990
170266133804565133804661
267342133807442133807517
343415133808429133808501
416480133814143133814207
481610133815051133815180
611757133815247133815393
758793133815551133815586
794956133815669133815831
9571165133816083133816291

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4206090Full LengthBC026784coiled-coil domain containing 101

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029339 NP_083615 Q9DA08 DUF1325

Related Sequences

 
mRNAGenPeptSwissProt
BC026784 AAH26784 Q9DA08
AK006287 BAB24506 Q9DA08
AK139102 BAE23890 Q9DA08
AK169898 BAE41445 Q9DA08

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccdc101 NP_083615 R.norvegicus Ccdc101 293488   NP_001107974 100
H.sapiens CCDC101 112869 Gene Info NP_612423 98
A.gambiae AgaP_AGAP005116 1274793   XP_313997 56
D.melanogaster Sgf29 37429   NP_726051 52
C.elegans Y17G9B.8 177246   NP_500635 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)