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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lyz2, lysozyme 2
Sequence ID:NM_017372
Entrez Gene ID:17105
Ensembl ID:ENSMUSG00000069516

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D2|10 66.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 117277540 - 117282272

NM_017372 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1647116714596116715242
648726116715698116715776
727891116717696116717860
8921057116719162116719327

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593360Full LengthBC002069lysozyme 2
6514977Full LengthBC054463lysozyme 2
2655292IncompleteBC019611lysozyme 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059068  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017372 NP_059068 P08905 EC 3.2.1.17 Lys

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002069 AAH02069 P08905 EC 3.2.1.17
BC019611 AAH19611 P08905 EC 3.2.1.17
BC054463 AAH54463 P08905 EC 3.2.1.17
AK148516 BAE28595 P08905 EC 3.2.1.17
AK150998 BAE30022 P08905 EC 3.2.1.17
AK153244 BAE31835 P08905 EC 3.2.1.17
AK153475 BAE32025 P08905 EC 3.2.1.17
AK159276 BAE34954 P08905 EC 3.2.1.17
AK159640 BAE35253 P08905 EC 3.2.1.17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lyz2 NP_059068 M.musculus Lyz1 17110 Gene Info NP_038618 92
R.norvegicus Lyz2 25211   NP_036903 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)