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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnc, tenascin C
Sequence ID:NM_011607
Entrez Gene ID:21923
Ensembl ID:ENSMUSG00000028364

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C1|4 32.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 63984460 - 63984733

 Exon Info From UCSC:
NM_011607

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40099589Full LengthBC117979tenascin C
40099596Full LengthBC117980tenascin C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035737  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011607 NP_035737   EGF
fn3
Fibrinogen_C
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
BC117979 AAI17980 Q148T5
BC117980 AAI17981 Q148T4
D90343 BAA14355 Q80YX1
AK040167 BAC30529 Q8C9Z1
X56304 CAA39751 Q80YX1
AJ236880 CAB44238 Q9WUU4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnc NP_035737 H.sapiens TNC 3371 Gene Info NP_002151 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)