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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scp2d1, SCP2 sterol-binding domain containing 1
Sequence ID:NM_025490
Entrez Gene ID:66328
Ensembl ID:ENSMUSG00000027431

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 H1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 144823665 - 144824414

NM_025490 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1750144649401144650150

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6773017Full LengthBC048653RIKEN cDNA 1700010M22 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079766  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025490 NP_079766 Q9DAH1 SCP2

Related Sequences

 
mRNAGenPeptSwissProt
BC048653 AAH48653 Q9DAH1
AK005847 BAB24272 Q9DAH1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 1700010M22Rik NP_079766 R.norvegicus RGD1308385 311491   NP_001101255 92
H.sapiens C20orf79 140856 Gene Info NP_848578 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)