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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apoa4, apolipoprotein A-IV
Sequence ID:NM_007468
Entrez Gene ID:11808
Ensembl ID:ENSMUSG00000032080

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.2|9 27.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 46241061 - 46243458

NM_007468 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13594604892646049284
3604864604955046049676
48716664605036146051540

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4240796Full LengthBC010769apolipoprotein A-IV
30013747Full LengthBC050149apolipoprotein A-IV

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031494  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007468 NP_031494 P06728 Apolipoprotein

Related Sequences

 
mRNAGenPeptSwissProt
M64248 AAA37214 P06728
M64249 AAA37215 P06728
M64250 AAA37216  
BC010769 AAH10769 P06728
BC050149 AAH50149 Q810I7
AK004856 BAB23620 Q9DBN0
AK143344 BAE25348 Q3UPP7
AK161535 BAE36447 P06728
AK168687 BAE40533 P06728

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apoa4 NP_031494 R.norvegicus Apoa4 25080   NP_036869 82
H.sapiens APOA4 337 Gene Info NP_000473 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)