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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tmed9, transmembrane emp24 protein transport domain containing 9
Sequence ID:NM_026211
Entrez Gene ID:67511
Ensembl ID:ENSMUSG00000058569

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13|13 B2

Chromosomal Position (from UCSC)

Chromosomal Position:13: 55593161 - 55597673

NM_026211 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12235569449555694717
2243245569486155694961
3254505569606555696190
4515975569682855696974
59814515569820155699054

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2648375Full LengthBC049282transmembrane emp24 protein transport domain containing 9
3501295Full LengthBC004691transmembrane emp24 protein transport domain containing 9
6476565Full LengthBC058801transmembrane emp24 protein transport domain containing 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080487  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026211 NP_080487 Q99KF1
Q9CZL0
EMP24_GP25L

Related Sequences

 
mRNAGenPeptSwissProt
BC004691 AAH04691 Q99KF1
BC049282 AAH49282 Q6PDC2
BC058801 AAH58801 Q6PDC2
Q99KF1
AK010259 BAB26802 Q6PDC2
Q99KF1
AK012474 BAB28266 Q9CZL0
AK044120 BAC31786 Q8BLM5
AK152496 BAE31266 Q6PDC2
AK152581 BAE31331 Q3U7N8
AK169001 BAE40800 Q3TFU8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmed9 NP_080487 R.norvegicus Tmed9 361207   NP_001009703 99
H.sapiens TMED9 54732 Gene Info NP_059980 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)