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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Srd5a1, steroid 5 alpha-reductase 1
Sequence ID:NM_175283
Entrez Gene ID:78925
Ensembl ID:ENSMUSG00000021594

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C1|13 39.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 69594504 - 69611354

NM_175283 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1717646971232669714073
176519156972546269725612
191620176973379369733894
201821846973910869739274
218526816974984469750340

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5053446Full LengthBC094503steroid 5 alpha-reductase 1
6807475Full LengthBC079863steroid 5 alpha-reductase 1
40100423Full LengthBC115468steroid 5 alpha-reductase 1
40100424Full LengthBC115469steroid 5 alpha-reductase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780492  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_175283 NP_780492 Q8BUR8   Steroid_dh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC079863 AAH79863 Q68FF9 EC 1.3.1.30
BC094503 AAH94503 Q68FF9 EC 1.3.1.30
BC115468 AAI15469 Q14C33  
BC115469 AAI15470 Q14C32  
AK082819 BAC38634 Q8BUR8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Srd5a1 NP_780492 R.norvegicus Srd5a1 24950   NP_058766 91
H.sapiens SRD5A1 6715 Gene Info NP_001038 63
A.thaliana DET2 818383   NP_181340 44
S.pombe SPAC9.08c 2543655   NP_593351 40
N.crassa NCU03337 3872611   XP_956446 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)