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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ciao1, cytosolic iron-sulfur protein assembly 1
Sequence ID:NM_025296
Entrez Gene ID:26371
Ensembl ID:ENSMUSG00000003662

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F3|2 62.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 127242564 - 127247760

NM_025296 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12100127066673127068772
21012188127070648127070735
21892390127071458127071659
23912479127072148127072236
24802591127072337127072448
25922740127072745127072893
27413075127073217127073551

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593736Full LengthBC004089cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079572  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025296 NP_079572 Q99KN2 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC004089 AAH04089 Q99KN2
AK002314 BAB22008 Q99KN2
AK028376 BAC25915 Q99KN2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ciao1 NP_079572 R.norvegicus Ciao1 29231   NP_001008766 99
H.sapiens CIAO1 9391 Gene Info NP_004795 95
A.gambiae CIAO1_ANOGA 1271794   XP_310648 59
D.melanogaster Ciao1 36655   NP_610996 59
A.thaliana emb1345 817147   NP_565615 52
A.thaliana AT4G32990 829436   NP_195025 48
S.cerevisiae CIA1 851860   NP_010553 48
C.elegans Y18D10A.9 173152   NP_493247 44
N.crassa NCU05426 3879397   XP_963249 43
P.falciparum PFL0470w 811147   XP_001350503 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)