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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab39b, RAB39B, member RAS oncogene family
Sequence ID:NM_175122
Entrez Gene ID:67790
Ensembl ID:ENSMUSG00000031202

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 75574580 - 75578007

NM_175122 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
129507281739672820345
295133627282313172823542

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6517891Full LengthBC050853RAB39B, member RAS oncogene family
6833461Full LengthBC052472RAB39B, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780331  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175122 NP_780331 Q8BHC1 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC050853 AAH50853 Q8BHC1
BC052472 AAH52472 Q8BHC1
AK039013 BAC30206 Q8BHC1
AK048981 BAC33503 Q8BHC1
AK160737 BAE35978 Q8BHC1
AB232636 BAF02898 Q0PD14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab39b NP_780331 H.sapiens RAB39B 116442 Gene Info NP_741995 100
A.gambiae AgaP_AGAP000433 1271812   XP_310666 63
C.elegans rab-39 183941   NP_495984 56
D.melanogaster Rab39 31684   NP_572405 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)