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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kdm4b, lysine (K)-specific demethylase 4B
Sequence ID:NM_172132
Entrez Gene ID:193796
Ensembl ID:ENSMUSG00000024201

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 D|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 56393919 - 56402870

 Exon Info From UCSC:
NM_172132

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3490671Full LengthBC007145jumonji domain containing 2B
3485001IncompleteBC005480jumonji domain containing 2B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_742144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172132 NP_742144 Q91VY5 JmjC
JmjN

Related Sequences

 
mRNAGenPeptSwissProt
BC005480 AAH05480 Q91VY5
BC007145 AAH07145 Q91VY5
AK028962 BAC26214 Q8C149
AK043678 BAC31617 Q8BLR3
AK129233 BAC98043 Q91VY5
AK141879 BAE24866 Q91VY5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kdm4b NP_742144 R.norvegicus LOC301128 301128   NP_001037701 97
H.sapiens KDM4B 23030 Gene Info NP_055830 84
A.gambiae AgaP_AGAP006770 1270293   XP_308975 64
D.melanogaster Kdm4A 35744   NP_610331 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)