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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Acer2, alkaline ceramidase 2
Sequence ID:NM_139306
Entrez Gene ID:230379
Ensembl ID:ENSMUSG00000038007

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 86874463 - 86920875

NM_139306 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11838652031786520499
1842988653206186532175
2994408653292786533068
4415788654638586546522
5797168655751986557656
71742048656329786566784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6839525Full LengthBC059819alkaline ceramidase 2
5708748IncompleteBC051923N-acylsphingosine amidohydrolase 3-like
5708748IncompleteBC060063N-acylsphingosine amidohydrolase 3-like
6831790IncompleteBC061463N-acylsphingosine amidohydrolase 3-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_647467  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_139306 NP_647467 Q8VD53 EC 3.5.1.23 aPHC

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC059819 AAH59819 Q8VD53 EC 3.5.1.23
AF282864 AAL40408 Q8VD53 EC 3.5.1.23
AY312515 AAQ85131 Q8VD53 EC 3.5.1.23
AK010770 BAB27170 Q9CWF9  
AK046888 BAC32911 Q9CWF9  
AK085306 BAC39416 Q8VD53 EC 3.5.1.23

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acer2 NP_647467 R.norvegicus Acer2 313339   NP_001101413 97
H.sapiens ACER2 340485 Gene Info NP_001010887 93
A.gambiae AgaP_AGAP008729 1275580   XP_314841 50
D.melanogaster bwa 250736   NP_610020 49
C.elegans W02F12.2 189124   NP_504697 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)