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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Pde6c, phosphodiesterase 6C, cGMP specific, cone, alpha prime
Sequence ID:NM_001170959
Entrez Gene ID:110855
Ensembl ID:ENSMUSG00000024992

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C3|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 38132945 - 38183739

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5358611Full LengthBC027050phosphodiesterase 6C, cGMP specific, cone, alpha prime

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_291092  

Protein Infomation

NM_001170959 NP_001164430      
NM_033614 NP_291092 Q91ZQ1 EC PDEase_I

Related Sequences

BC027050 AAH27050 Q91ZQ1 EC
AF411063 AAK96254 Q91ZQ1 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Pde6c NP_291092 R.norvegicus Pde6c 361752   NP_001101992 95
H.sapiens PDE6C 5146 Gene Info NP_006195 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)