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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxn1, forkhead box N1
Sequence ID:NM_008238
Entrez Gene ID:15218
Ensembl ID:ENSMUSG00000002057

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 78358357 - 78371969

NM_008238 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17837817178978172571
78412757817427878174769
127614837817492778175134
148415807817944278179538
158117117818036878180498
171218257818220878182321
182622877818445878184919
228824397818531778185468
244025037819999678200059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047616Full LengthBC108980forkhead box N1
40047617Full LengthBC108981forkhead box N1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032264  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008238 NP_032264 Q5SYK1
Q61575
Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC108980 AAI08981 Q32MU3
BC108981 AAI08982 Q5SYK1
Q61575
X81593 CAA57279 Q5SYK1
Q61575

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxn1 NP_032264 R.norvegicus Foxn1 287469   NP_001094118 96
H.sapiens FOXN1 8456 Gene Info NP_003584 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)