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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pkp1, plakophilin 1
Sequence ID:NM_019645
Entrez Gene ID:18772
Ensembl ID:ENSMUSG00000026413

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 135872082 - 135919207

 Exon Info From UCSC:
NM_019645

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862063Full LengthBC139041plakophilin 1
8862064Full LengthBC139042plakophilin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019645 NP_062619 P97350 Arm

Related Sequences

 
mRNAGenPeptSwissProt
BC139041 AAI39042 P97350
BC139042 AAI39043 P97350
Y07941 CAA69240 P97350

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pkp1 NP_062619 R.norvegicus Pkp1 304822   NP_001100651 97
H.sapiens PKP1 5317 Gene Info NP_001005337 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)