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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tlr9, toll-like receptor 9
Sequence ID:NM_031178
Entrez Gene ID:81897
Ensembl ID:ENSMUSG00000045322

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F1|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 106222597 - 106226876

NM_031178 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1109106124928106125036
1103471106125845106129206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069452Full LengthBC172644toll-like receptor 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112455  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031178 NP_112455 Q9EQU3 LRR_1
TIR

Related Sequences

 
mRNAGenPeptSwissProt
BC172644 AAI72644 Q9EQU3
AF314224 AAK28488 Q9EQU3
AF348140 AAK29625 Q9EQU3
AB045181 BAB19260 Q9EQU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tlr9 NP_112455 H.sapiens TLR9 54106 Gene Info NP_059138 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)