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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnr, tenascin R
Sequence ID:NM_022312
Entrez Gene ID:21960
Ensembl ID:ENSMUSG00000015829

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E2|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 159523772 - 159850118

 Exon Info From UCSC:
NM_022312

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861062Full LengthBC138043tenascin R
40130669Full LengthBC132392tenascin R

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071707  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022312 NP_071707 Q8BYI9 fn3
Fibrinogen_C
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
BC132392 AAI32393 Q8BYI9
BC138043 AAI38044 Q8BYI9
AK039390 BAC30335 Q8BYI9
AJ005844 CAA06739 Q8BYI9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnr NP_071707 R.norvegicus Tnr 25567   NP_037177 98
H.sapiens TNR 7143 Gene Info NP_003276 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)