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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pyhin1, Pyrin and HIN domain family, member 1
Sequence ID:NM_175026
Entrez Gene ID:236312
Ensembl ID:ENSMUSG00000043263

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 173631088 - 173642896

NM_175026 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1297175560989175561285
298579175567416175567697
580716175568996175569132
717956175571135175571374
9571370175572617175573030
13711559175574778175574966
15603497175576121175578058

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30752094Full LengthBC096384pyrin and HIN domain family, member 1
40056703Full LengthBC107378pyrin and HIN domain family, member 1
40056704Full LengthBC107379pyrin and HIN domain family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_778191  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175026 NP_778191 Q8BV49 PAAD_DAPIN
HIN

Related Sequences

 
mRNAGenPeptSwissProt
BC096384 AAH96384 Q8BV49
BC107378 AAI07379 Q8BV49
BC107379 AAI07380 Q8BV49
AK040884 BAC30731 Q8BV49
AK076726 BAC36457 Q8BV49
AK080371 BAC37894 Q8BV49
AK150817 BAE29880 Q8BV49

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pyhin1 NP_778191 M.musculus BC094916 545384 Gene Info NP_001019892 91
M.musculus Ifi204 15951 Gene Info NP_032355 63
M.musculus Gm4955 240921 Gene Info XP_136331 53
M.musculus Ifi203 15950 Gene Info NP_001038946 52
M.musculus Gm16340 100504287 Gene Info XP_003084512 52
M.musculus AI607873 226691 Gene Info XP_985790 52
M.musculus Pydc4 623121 Gene Info NP_001170820 48
M.musculus Pydc3 100033459 Gene Info NP_001156410 41
M.musculus Mndal 100040462   NP_001164324 40
M.musculus Mnda 381308 Gene Info NP_001028622 40
M.musculus Ifi205 226695 Gene Info NP_766236 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)