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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc6a11, solute carrier family 6 (neurotransmitter transporter, GABA), member 11
Sequence ID:NM_172890
Entrez Gene ID:243616
Ensembl ID:ENSMUSG00000030307

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6 49.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 114131240 - 114249886

 Exon Info From UCSC:
NM_172890

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015220BC146307solute carrier family 6 (neurotransmitter transporter, GABA), member 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766478  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172890 NP_766478 P31650 SNF

Related Sequences

 
mRNAGenPeptSwissProt
BC146307 AAI46308  
AK053078 BAC35259 P31650
AK053261 BAC35326 Q8BKG0
AK140423 BAE24379 P31650

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc6a11 NP_766478 R.norvegicus Slc6a11 79213   NP_077348 100
H.sapiens SLC6A11 6538 Gene Info NP_055044 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)