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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Htr1b, 5-hydroxytryptamine (serotonin) receptor 1B
Sequence ID:NM_010482
Entrez Gene ID:15551
Ensembl ID:ENSMUSG00000049511

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 E1|9 46.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 81631336 - 81632615

NM_010482 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111618152499881526158

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733878Full LengthBC1191295-hydroxytryptamine (serotonin) receptor 1B
40130228Full LengthBC1319515-hydroxytryptamine (serotonin) receptor 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034612  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010482 NP_034612 P28334 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC119129 AAI19130 Q0VES5
BC131951 AAI31952 Q0VES5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Htr1b NP_034612 R.norvegicus Htr1b 25075   NP_071561 98
H.sapiens HTR1B 3351 Gene Info NP_000854 93
A.gambiae GPRNNA20 1274062   XP_313127 45
A.gambiae GPR5HT7 1274064   XP_313129 42
D.melanogaster 5-HT7 43669   NP_524599 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)