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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cckbr, cholecystokinin B receptor
Sequence ID:NM_007627
Entrez Gene ID:12426
Ensembl ID:ENSMUSG00000030898

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 105426024 - 105435422

NM_007627 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1356112574333112574688
357608112582096112582347
609858112582508112582757
8591034112583033112583208
10352483112583403112584851

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40039474Full LengthBC103531cholecystokinin B receptor
40039475Full LengthBC103538cholecystokinin B receptor
40039482Full LengthBC103530cholecystokinin B receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031653  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007627 NP_031653 Q3ZB46
P56481
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF019371 AAB71863 Q3ZB46
P56481
BC103530 AAI03531 Q3ZB53
BC103531 AAI03532 Q3ZB46
P56481
BC103538 AAI03539 Q3ZB46
P56481
AK028325 BAC25881 Q3ZB46
P56481
AK039721 BAC30428 Q8BYG7
AK053307 BAC35337 Q8BKF6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cckbr NP_031653 R.norvegicus Cckbr 25706   NP_037297 93
H.sapiens CCKBR 887 Gene Info NP_795344 90
A.gambiae GPRCCK1 1270512   XP_001237203 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)