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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc8a3, Solute carrier family 8 (sodium/calcium exchanger), member 3
Sequence ID:NM_080440
NM_001167920
Entrez Gene ID:110893
Ensembl ID:ENSMUSG00000079055

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D1|12 41.0

Chromosomal Position (from UCSC)

Chromosomal Position:12: 81314570 - 81314846

 Exon Info From UCSC:
NM_080440
NM_001167920

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6837128Full LengthBC052435solute carrier family 8 (sodium/calcium exchanger), member 3
30357598Full LengthBC080862solute carrier family 8 (sodium/calcium exchanger), member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536688  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167920 NP_001161392    
NM_080440 NP_536688 Q8VHJ8 Na_Ca_ex
Calx-beta

Related Sequences

 
mRNAGenPeptSwissProt
AF321404 AAG42826 Q9EPU8
BC052435 AAH52435 Q7TS90
BC080862 AAH80862 Q7TS90
AF453257 AAL39160 Q8VHJ8
AB080746 BAB85835 Q8R503
AK044636 BAC32013 Q8BXN1
AK136288 BAE22917 Q3UWJ8
AK139260 BAE23935 Q3UTP5
AK165197 BAE38073 Q7TS90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc8a3 NP_536688 R.norvegicus Slc8a3 140448   NP_511175 96
H.sapiens SLC8A3 6547 Gene Info NP_489479 95
C.elegans ncx-2 178918   NP_504415 51
A.thaliana MHX 819373   NP_566105 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)