Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Chat, choline acetyltransferase
Sequence ID:NM_009891
Entrez Gene ID:12647
Ensembl ID:ENSMUSG00000021919

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 B|14 10.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 32408202 - 32465909

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734071Full LengthBC119322choline acetyltransferase
40129512Full LengthBC120589choline acetyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034021  

Protein Infomation

NM_009891 NP_034021 Q8BQV2   Carn_acyltransf

Related Sequences

BC119322 AAI19323 Q8BQV2  
BC120589 AAI20590 Q8BQV2  
D12487 BAA02056 Q03059 EC
D12490 BAA02057 Q03059 EC
D12488 BAA20976 Q03059 EC
D12489 BAA20977 Q03059 EC
D12491 BAA20978 Q03059 EC
D12492 BAA20979 Q03059 EC
D12493 BAA20980 Q03059 EC
AK046406 BAC32710 Q8BQV2  
AK047708 BAC33133 Q8BQN4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Chat NP_034021 R.norvegicus Chat 290567   XP_224626 94
H.sapiens CHAT 1103 Gene Info NP_065574 88
A.gambiae AgaP_AGAP002370 1273593   XP_312586 43
D.melanogaster Cha 42249   NP_477004 41
C.elegans unc-17 177124   NP_001023603 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)