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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cldn11, claudin 11
Sequence ID:NM_008770
Entrez Gene ID:18417
Ensembl ID:ENSMUSG00000037625

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A3|3 12.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 31150149 - 31163308

NM_008770 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14563104884131049296
4576213105283531052999
62218723106199731063247

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4190031Full LengthBC021659claudin 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032796  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008770 NP_032796 Q60771 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
U19582 AAB50270 Q60771
AF124426 AAD17321 Q60771
BC021659 AAH21659 Q60771
AK005088 BAB23810 Q60771
AK005171 BAB23860 Q60771
AK161698 BAE36538 Q60771

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cldn11 NP_032796 R.norvegicus Cldn11 84588   NP_445909 100
H.sapiens CLDN11 5010 Gene Info NP_005593 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)