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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cacna1b, calcium channel, voltage-dependent, N type, alpha 1B subunit
Sequence ID:NM_001042528
NM_007579
Entrez Gene ID:12287
Ensembl ID:ENSMUSG00000004113

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A2|2 18.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 24606569 - 24763047

 Exon Info From UCSC:
NM_001042528
NM_007579

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031605  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042528 NP_001035993 O55017  
NM_007579 NP_031605   Ion_trans
PKD_channel

Related Sequences

 
mRNAGenPeptSwissProt
U04999 AAB60437 O55017
AF042317 AAB97840 O55017
FJ609386 ACM24798 B9VVV1
AK134542 BAE22176 Q3UYN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacna1b NP_001035993 R.norvegicus Cacna1b 257648   NP_671482 98
H.sapiens CACNA1B 774 Gene Info NP_000709 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)