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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptx3, pentraxin related gene
Sequence ID:NM_008987
Entrez Gene ID:19288
Ensembl ID:ENSMUSG00000027832

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 E1|3 33.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 66220287 - 66221418

NM_008987 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13056602380866024112
3067076602457166024972
70819226602851366029727

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4012053Full LengthBC022176pentraxin related gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008987 NP_033013 P48759 Pentaxin

Related Sequences

 
mRNAGenPeptSwissProt
BC022176 AAH22176 P48759
X83601 CAA58580 P48759

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptx3 NP_033013 R.norvegicus Ptx3 689388   NP_001103006 94
H.sapiens PTX3 5806 Gene Info NP_002843 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)