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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc10a5, Solute carrier family 10 (sodium/bile acid cotransporter family), member 5
Sequence ID:NM_001010834
Entrez Gene ID:241877
Ensembl ID:ENSMUSG00000058921

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 10331733 - 10335656

NM_001010834 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
139231033173310335655

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055990Full LengthBC141377solute carrier family 10 (sodium/bile acid cotransporter family), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001010834  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001010834 NP_001010834 Q5PT54 SBF

Related Sequences

 
mRNAGenPeptSwissProt
BC141377 AAI41378 Q5PT54
AY825925 AAV80708 Q5PT54
AK143900 BAE25589 Q5PT54

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc10a5 NP_001010834 R.norvegicus Slc10a5 310230   NP_001020451 85
H.sapiens SLC10A5 347051 Gene Info NP_001010893 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)