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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arntl2, aryl hydrocarbon receptor nuclear translocator-like 2
Sequence ID:NM_172309
Entrez Gene ID:272322
Ensembl ID:ENSMUSG00000040187

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 146805529 - 146832646

 Exon Info From UCSC:
NM_172309

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047159Full LengthBC108965aryl hydrocarbon receptor nuclear translocator-like 2
40047160IncompleteBC108966aryl hydrocarbon receptor nuclear translocator-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_758513  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172309 NP_758513 Q2VPD4 HLH
PAS
PAS_3

Related Sequences

 
mRNAGenPeptSwissProt
AY005163 AAF88141 Q2VPD4
BC108965 AAI08966 Q2VPD4
BC108966 AAI08967 Q2VPD4
AY014836 AAK12619 Q2VPD4
DQ322241 ABC50103 Q1A532
DQ355143 ABC79590 Q1A3C9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arntl2 NP_758513 H.sapiens ARNTL2 56938 Gene Info NP_064568 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)